EPIphany: A Platform for Epitope Microarray Analysis

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EPIphany is a software platform that analyzes microarray data and highlights potential epitopes.

Email Address

Control Samples

Treatment Samples

Upload Format

• GPR
• CSV

Preprocessing Method

• Foreground Values
• Background Subtraction
• Background Scaling

Normalization Method

• None
• Quantile
• VSN

False Discovery Rate

• 0.01
• 0.05
• 0.10
• 0.25

Restrict

• Up
• Down
• All

Rank Cutoff

• 10
• 20
• 50
• 100
• 200

Primary Outputs

• Probe Intensities & Rankings

Plotting Options

• Swarmplot
• Heatmap
• Dendrogram
• Boxplot
• PCA plot of KMeans Clusters
• PCA plot of Agglomerative Clusters
• Mean Variance Plot
• Mean Median Plot

Submit

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